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atomworks 3.0.3 documentation - Home atomworks 3.0.3 documentation - Home
  • Tutorial
  • How to Build a Model with AtomWorks
  • Cookbook
  • Installation
  • Glossary
  • API
  • Examples
  • Contributing
    • Data Mirrors
    • Hugging Face dataset repositories
    • Multiple Sequence Alignment in AtomWorks
  • GitHub
  • Tutorial
  • How to Build a Model with AtomWorks
  • Cookbook
  • Installation
  • Glossary
  • API
  • Examples
  • Contributing
  • Data Mirrors
  • Hugging Face dataset repositories
  • Multiple Sequence Alignment in AtomWorks
  • GitHub

Section Navigation

  • Part 1: Prepare the Data
  • Part 2: Creating a Transform Pipeline
  • Part 3: Write a Model
  • Part 4: Train a Model
  • Scripts
  • How to Build a Model with AtomWorks

How to Build a Model with AtomWorks#

This tutorial demonstrates how to build a graph neural network model using AtomWorks to predict the bound pose of a ligand within a fixed protein pocket.

  • Part 1: Prepare the Data
  • Part 2: Creating a Transform Pipeline
  • Part 3: Write a Model
  • Part 4: Train a Model
  • Scripts

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Part 1: Prepare the Data

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